Transcript: lnc-DNAAF4-2:3

Basic information

LNCipedia transcript ID: lnc-DNAAF4-2:3 
LNCipedia gene ID: lnc-DNAAF4-2
Location (hg19): chr15:55647446-55790586
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4617 bp
Exons: 16
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261771.1|ENST00000565113.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4168.3622 coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DNAAF4-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DYX1C1-CCPG1-2:5
5.0 lnc-DYX1C1-CCPG1-2:5
5.1 lnc-DNAAF4-3:2
5.2 lnc-DNAAF4-2:3