Transcript: lnc-DNAAF5-1:12

Basic information

LNCipedia transcript ID: lnc-DNAAF5-1:12 
LNCipedia gene ID: lnc-DNAAF5-1
Location (hg19): chr7:642454-653481
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4453 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237181.1|MICT00000317008.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.5022 non-coding 
CPAT coding probability 21.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAAF5-1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HEATR2-1:26
5.0 lnc-HEATR2-1:26
5.1 lnc-GPER1-24:17
5.2 lnc-DNAAF5-1:12