Transcript: lnc-DNAH8-1:1

Basic information

LNCipedia transcript ID: lnc-DNAH8-1:1 
LNCipedia gene ID: lnc-DNAH8-1
Location (hg19): chr6:38681827-38682993
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 400 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00011301; ENST00000439844; ENST00000439844.1; RP3-503A6.2-001; OTTHUMT00000040437.1; NONHSAT112329
Alternative gene names: XLOC_005281; linc-DNAH8-1; ENSG00000236355; RP3-503A6.2; ENSG00000236355.1; OTTHUMG00000014635.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -226.4957 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAH8-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DNAH8-1:1
3.1 lnc-DNAH8-1:1
4.0 lnc-DNAH8-1:1
4.1 lnc-DNAH8-1:1
5.0 lnc-DNAH8-1:1
5.1 lnc-PI16-56:1
5.2 lnc-DNAH8-1:1