Transcript: lnc-DNAJB12-2:1

Basic information

LNCipedia transcript ID: lnc-DNAJB12-2:1 
LNCipedia gene ID: lnc-DNAJB12-2
Ensembl Gene ID: ENSG00000282915
Ensembl Transcript ID: ENST00000605385
Location (hg19): chr10:74227507-74233062
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 479 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT013921; ENST00000605385.1
Alternative gene names: ENSG00000282915.1; RP11-205A8.4; AC091769.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.5266 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAJB12-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAJB12-2:1
4.0 lnc-DNAJB12-2:1
4.1 lnc-DNAJB12-2:1
5.0 lnc-DNAJB12-2:1
5.1 lnc-VSIR-11:1
5.2 lnc-DNAJB12-2:1