Transcript: lnc-DNAJC10-2:1

Basic information

LNCipedia transcript ID: lnc-DNAJC10-2:1 
LNCipedia gene ID: lnc-DNAJC10-2
Location (hg19): chr2:183654087-183659706
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 5620 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT075921; FPKM1_group_17811_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.203 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAJC10-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAJC10-2:1
4.0 lnc-DNAJC10-2:1
4.1 lnc-DNAJC10-2:1
5.0 lnc-DNAJC10-2:1
5.1 lnc-ITGAV-22:1
5.2 lnc-DNAJC10-2:1