Transcript: lnc-DNAJC15-2:1

Basic information

LNCipedia transcript ID: lnc-DNAJC15-2:1 
LNCipedia gene ID: lnc-DNAJC15-2
Location (hg19): chr13:43787255-43787647
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 310 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021771; NONHSAT033458
Alternative gene names: XLOC_010367; linc-C13orf31-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.6399 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAJC15-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DNAJC15-2:1
3.1 lnc-DNAJC15-2:1
4.0 lnc-DNAJC15-2:1
4.1 lnc-DNAJC15-2:1
5.0 lnc-DNAJC15-2:1
5.1 lnc-KL-95:1
5.2 lnc-DNAJC15-2:1