Transcript: lnc-DNAJC5-1:2

Basic information

LNCipedia transcript ID: lnc-DNAJC5-1:2 
LNCipedia gene ID: lnc-DNAJC5-1
Location (hg19): chr20:62550809-62565394
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 946 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT080958
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 235.8108 coding 
CPAT coding probability 97.47% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DNAJC5-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAJC5-1:2
4.0 lnc-DNAJC5-1:2
4.1 lnc-DNAJC5-1:2
5.0 lnc-DNAJC5-1:2
5.1 lnc-GNAS-84:2
5.2 lnc-DNAJC5-1:2