Transcript: lnc-DPH6-5:1

Basic information

LNCipedia transcript ID: lnc-DPH6-5:1 
LNCipedia gene ID: lnc-DPH6-5
Location (hg19): chr15:36119402-36122394
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 618 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1133_chr15:36119401-36122394_ovary
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -231.0181 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DPH6-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATPBD4-5:1
4.0 lnc-ATPBD4-5:1
4.1 lnc-ATPBD4-5:1
5.0 lnc-ATPBD4-5:1
5.1 lnc-NANOGP8-6:1
5.2 lnc-DPH6-5:1