Transcript: lnc-DPP6-2:2

Basic information

LNCipedia transcript ID: lnc-DPP6-2:2 
LNCipedia gene ID: lnc-DPP6-2
Ensembl Gene ID: ENSG00000272760
Ensembl Transcript ID: ENST00000608064
Location (hg19): chr7:154742936-154743898
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 963 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608064.1
Alternative gene names: ENSG00000272760.1; RP11-5C23.1; AC093726.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.145 non-coding 
CPAT coding probability 3.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DPP6-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC093726.6.1-2:1
4.0 lnc-AC093726.6.1-2:1
4.1 lnc-AC093726.6.1-2:1
5.0 lnc-AC093726.6.1-2:1
5.1 lnc-DPP6-15:1
5.2 lnc-DPP6-2:2