Transcript: lnc-DPP6-3:4

Basic information

LNCipedia transcript ID: lnc-DPP6-3:4 
LNCipedia gene ID: lnc-DPP6-3
Ensembl Gene ID: ENSG00000273183
Ensembl Transcript ID: ENST00000609134
Location (hg19): chr7:154748139-154748817
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 679 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609134.1
Alternative gene names: ENSG00000273183.1; RP11-5C23.2; AC093726.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -162.2905 non-coding 
CPAT coding probability 11.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DPP6-3:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC093726.6.1-3:1
4.0 lnc-AC093726.6.1-3:1
4.1 lnc-AC093726.6.1-3:1
5.0 lnc-AC093726.6.1-3:1
5.1 lnc-DPP6-3:3
5.2 lnc-DPP6-3:4