Transcript: lnc-DPPA4-1:2

Basic information

LNCipedia transcript ID: lnc-DPPA4-1:2 
LNCipedia gene ID: lnc-DPPA4-1
Location (hg19): chr3:109043198-109079671
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2421 bp
Exons: 14
Sources: Nielsen et al.,2014
Alternative transcript names: l_2432_chr3:109043197-109051882_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.1623 non-coding 
CPAT coding probability 3.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DPPA4-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DPPA2-1:1
4.0 lnc-DPPA4-1:2
4.1 lnc-DPPA4-1:2
5.0 lnc-DPPA4-1:2
5.1 lnc-IFT57-18:1
5.2 lnc-DPPA4-1:2