Transcript: lnc-DPT-2:1

Basic information

LNCipedia transcript ID: lnc-DPT-2:1 
LNCipedia gene ID: lnc-DPT-2
Location (hg19): chr1:168697902-168753457
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 382 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_146_chr1:168697901-168753457_adipose
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 311.2592 coding 
CPAT coding probability 3.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DPT-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DPT-2:1
4.0 lnc-DPT-2:1
4.1 lnc-DPT-2:1
5.0 lnc-DPT-2:1
5.1 lnc-SH2D1B-79:1
5.2 lnc-DPT-2:1