Transcript: lnc-DRD5-10:15

Basic information

LNCipedia transcript ID: lnc-DRD5-10:15 
LNCipedia gene ID: lnc-DRD5-10
Ensembl Gene ID: ENSG00000249631
Ensembl Transcript ID: ENST00000514452
Location (hg19): chr4:11771992-11775495
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 387 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007477; ENST00000514452; ENST00000514452.1; RP11-281P23.2-010; OTTHUMT00000359059.1; NONHSAT095551
Alternative gene names: XLOC_003457; linc-CPEB2-10; ENSG00000249631; RP11-281P23.2; ENSG00000249631.1; OTTHUMG00000160044.4; ENSG00000249631.5; AC005699.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -121.0839 non-coding 
CPAT coding probability 2.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DRD5-10:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DRD5-8:15
3.1 lnc-DRD5-10:15
4.0 lnc-DRD5-10:15
4.1 lnc-DRD5-10:15
5.0 lnc-DRD5-10:15
5.1 lnc-USP17L28-15:29
5.2 lnc-DRD5-10:15