Transcript: lnc-DTNB-1:2

Basic information

LNCipedia transcript ID: lnc-DTNB-1:2 
LNCipedia gene ID: lnc-DTNB-1
Ensembl Gene ID: ENSG00000235072
Ensembl Transcript ID: ENST00000313031
Location (hg19): chr2:25592005-25593556
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1552 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000313031.2
Alternative gene names: ENSG00000235072.2; AC012074.2; AC012074.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -26.4627 non-coding 
CPAT coding probability 9.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DTNB-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-DTNB-1:2
4.1 lnc-DTNB-1:2
5.0 lnc-DTNB-1:2
5.1 lnc-DNAJC27-10:2
5.2 lnc-DTNB-1:2