Transcript: lnc-DTWD2-15:2

Basic information

LNCipedia transcript ID: lnc-DTWD2-15:2 
LNCipedia gene ID: lnc-DTWD2-15
Location (hg19): chr5:118682082-118691468
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 404 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000081003.1|FTMT21700025349.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -198.4009 non-coding 
CPAT coding probability 2.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DTWD2-15:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DTWD2-15:2
5.0 lnc-DTWD2-15:2
5.1 lnc-LOX-32:5
5.2 lnc-DTWD2-15:2