Transcript: lnc-DUSP1-4:11

Basic information

LNCipedia transcript ID: lnc-DUSP1-4:11 
LNCipedia gene ID: lnc-DUSP1-4
Location (hg19): chr5:172383600-172385787
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2188 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000204758.3|ENCT00000365325.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.4278 non-coding 
CPAT coding probability 4.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DUSP1-4:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DUSP1-4:11
5.0 lnc-DUSP1-4:11
5.1 lnc-PDLIM7-74:12
5.2 lnc-DUSP1-4:11