Transcript: lnc-DYRK1B-2:1

Basic information

LNCipedia transcript ID: lnc-DYRK1B-2:1 
LNCipedia gene ID: lnc-DYRK1B-2
Ensembl Gene ID: ENSG00000276445
Ensembl Transcript ID: ENST00000617916
Location (hg19): chr19:40303612-40304195
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 584 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000617916.1
Alternative gene names: ENSG00000276445.1; LLNLR-268E12.1; AC005393.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -113.6069 non-coding 
CPAT coding probability 5.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DYRK1B-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-DYRK1B-2:1
4.1 lnc-DYRK1B-2:1
5.0 lnc-DYRK1B-2:1
5.1 lnc-PRX-28:1
5.2 lnc-DYRK1B-2:1