Transcript: lnc-EAF2-2:1

Basic information

LNCipedia transcript ID: lnc-EAF2-2:1 
LNCipedia gene ID: lnc-EAF2-2
Location (hg19): chr3:121487691-121490825
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2011 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2448_chr3:121487690-121490825_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.6195 non-coding 
CPAT coding probability 0.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EAF2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EAF2-2:1
4.0 lnc-EAF2-2:1
4.1 lnc-EAF2-2:1
5.0 lnc-EAF2-2:1
5.1 lnc-DTX3L-12:1
5.2 lnc-EAF2-2:1