Transcript: lnc-EBNA1BP2-1:6

Basic information

LNCipedia transcript ID: lnc-EBNA1BP2-1:6 
LNCipedia gene ID: lnc-EBNA1BP2-1
Location (hg19): chr1:43660355-43716062
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 732 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT002787
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.92 non-coding 
CPAT coding probability 34.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EBNA1BP2-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf210-1:6
4.0 lnc-EBNA1BP2-1:6
4.1 lnc-EBNA1BP2-1:6
5.0 lnc-EBNA1BP2-1:6
5.1 lnc-C1orf210-3:6
5.2 lnc-EBNA1BP2-1:6