Transcript: lnc-EDC3-2:17

Basic information

LNCipedia transcript ID: lnc-EDC3-2:17 
LNCipedia gene ID: lnc-EDC3-2
Location (hg19): chr15:74891257-74902707
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1698 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260919.1|FTMT25700060431.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -70.726 non-coding 
CPAT coding probability 90.97% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-EDC3-2:17 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-EDC3-2:17
5.0 lnc-EDC3-2:17
5.1 lnc-PKM-65:16
5.2 lnc-EDC3-2:17