Transcript: lnc-EDEM3-5:1

Basic information

LNCipedia transcript ID: lnc-EDEM3-5:1 
LNCipedia gene ID: lnc-EDEM3-5
Location (hg19): chr1:184856873-184859319
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 521 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT008403
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.93 non-coding 
CPAT coding probability 21.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EDEM3-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EDEM3-5:1
4.0 lnc-EDEM3-5:1
4.1 lnc-EDEM3-5:1
5.0 lnc-EDEM3-5:1
5.1 lnc-MYOG-150:1
5.2 lnc-EDEM3-5:1