Transcript: lnc-EEF1B2-2:8

Basic information

LNCipedia transcript ID: lnc-EEF1B2-2:8 
LNCipedia gene ID: lnc-EEF1B2-2
Location (hg19): chr2:206949379-206951288
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 702 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227946.1|ENST00000420509.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -210.65 non-coding 
CPAT coding probability 6.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EEF1B2-2:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-EEF1B2-2:8
5.0 lnc-EEF1B2-2:8
5.1 lnc-NOP58-48:2
5.2 lnc-EEF1B2-2:8