Transcript: lnc-EEF1E1-2:1

Basic information

LNCipedia transcript ID: lnc-EEF1E1-2:1 
LNCipedia gene ID: lnc-EEF1E1-2
RefSeq ID: NR_037618
Location (hg19): chr6:8013800-8102828
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2992 bp
Exons: 7
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_037618; NR_037618.1
Alternative gene names: EEF1E1-BLOC1S5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1696.7829 coding 
CPAT coding probability 64.91% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-EEF1E1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MUTED-2:1
4.0 lnc-TXNDC5-2:2
4.1 lnc-TXNDC5-2:2
5.0 lnc-TXNDC5-2:2
5.1 lnc-ECI2-213:1
5.2 lnc-EEF1E1-2:1