Transcript: lnc-EGR2-3:1

Basic information

LNCipedia transcript ID: lnc-EGR2-3:1 
LNCipedia gene ID: lnc-EGR2-3
Location (hg19): chr10:64574193-64679660
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 686 bp
Exons: 8
Sources: NONCODE v4
Alternative transcript names: NONHSAT013589
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.443 non-coding 
CPAT coding probability 73.65% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-EGR2-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EGR2-3:1
4.0 lnc-EGR2-3:1
4.1 lnc-EGR2-3:1
5.0 lnc-EGR2-3:1
5.1 lnc-C10orf105-92:1
5.2 lnc-EGR2-3:1