Transcript: lnc-EIF2S3B-5:1

Basic information

LNCipedia transcript ID: lnc-EIF2S3B-5:1 
LNCipedia gene ID: lnc-EIF2S3B-5
Location (hg19): chr12:10717846-10718105
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 260 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_ge08_STYK1_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.4695 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EIF2S3B-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF2S3L.1-5:1
4.0 lnc-EIF2S3L.1-5:1
4.1 lnc-EIF2S3L.1-5:1
5.0 lnc-EIF2S3L.1-5:1
5.1 lnc-BCL2L14-46:1
5.2 lnc-EIF2S3B-5:1