Transcript: lnc-ELAVL4-11:2

Basic information

LNCipedia transcript ID: lnc-ELAVL4-11:2 
LNCipedia gene ID: lnc-ELAVL4-11
RefSeq ID: NR_125988
Location (hg19): chr1:49723083-49734966
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 575 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT003143; NR_125988; NR_125988.1
Alternative gene names: LOC101929721


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -144.473 non-coding 
CPAT coding probability 1.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELAVL4-11:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL645730.2-1:2
4.0 lnc-AL645730.2-1:2
4.1 lnc-AL645730.2-1:2
5.0 lnc-AL645730.2-1:2
5.1 lnc-CDKN2C-31:2
5.2 lnc-ELAVL4-11:2