Transcript: lnc-ELF4-1:1

Basic information

LNCipedia transcript ID: lnc-ELF4-1:1 
LNCipedia gene ID: lnc-ELF4-1
Location (hg19): chrX:129133376-129133644
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 269 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: predAs_ge08_RAB33A_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -99.1164 non-coding 
CPAT coding probability 3.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELF4-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ELF4-1:1
4.0 lnc-ELF4-1:1
4.1 lnc-ELF4-1:1
5.0 lnc-ELF4-1:1
5.1 lnc-HS6ST2-20:1
5.2 lnc-ELF4-1:1