Transcript: lnc-ELFN2-2:8

Basic information

LNCipedia transcript ID: lnc-ELFN2-2:8 
LNCipedia gene ID: lnc-ELFN2-2
Location (hg19): chr22:37771745-37816530
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 481 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000424973.1; RP1-63G5.5-005; OTTHUMT00000318914.1; NONHSAT086588
Alternative gene names: ENSG00000243902.1; RP1-63G5.5; OTTHUMG00000150561.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -279.7593 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELFN2-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MFNG-2:4
4.0 lnc-ELFN2-2:8
4.1 lnc-ELFN2-2:8
5.0 lnc-ELFN2-2:8
5.1 lnc-MYH9-23:5
5.2 lnc-ELFN2-2:8