Transcript: lnc-ELOVL1-1:2

Basic information

LNCipedia transcript ID: lnc-ELOVL1-1:2 
LNCipedia gene ID: lnc-ELOVL1-1
Ensembl Gene ID: ENSG00000234694
Ensembl Transcript ID: ENST00000424948
Location (hg19): chr1:43820355-43824329
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 661 bp
Exons: 3
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00000509; ENST00000424948.1; RP1-92O14.3-001; OTTHUMT00000019513.1; NONHSAT002796
Alternative gene names: XLOC_000808; linc-C1orf210; ENSG00000234694.1; RP1-92O14.3; OTTHUMG00000007424.1; AL139289.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.0993 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELOVL1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ELOVL1-1:2
3.1 lnc-ELOVL1-1:2
4.0 lnc-ELOVL1-1:2
4.1 lnc-ELOVL1-1:2
5.0 lnc-ELOVL1-1:2
5.1 lnc-C1orf210-1:14
5.2 lnc-ELOVL1-1:2