Transcript: lnc-EMC8-6:2

Basic information

LNCipedia transcript ID: lnc-EMC8-6:2 
LNCipedia gene ID: lnc-EMC8-6
Location (hg19): chr16:86115627-86123132
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6818 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00024306
Alternative gene names: XLOC_012041; linc-COX4NB-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.2901 non-coding 
CPAT coding probability 53.06% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-EMC8-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC092327.1-5:1
3.1 lnc-AC092327.1-5:2
4.0 lnc-AC092327.1-5:2
4.1 lnc-AC092327.1-5:2
5.0 lnc-AC092327.1-5:2
5.1 lnc-MTHFSD-5:9
5.2 lnc-EMC8-6:2