Transcript: lnc-ENOSF1-5:2

Basic information

LNCipedia transcript ID: lnc-ENOSF1-5:2 
LNCipedia gene ID: lnc-ENOSF1-5
Ensembl Gene ID: ENSG00000176912
Ensembl Transcript ID: ENST00000585033
Location (hg19): chr18:641320-658269
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 560 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000585033.1
Alternative gene names: ENSG00000176912.3; TYMSOS


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.1644 non-coding 
CPAT coding probability 43.29% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ENOSF1-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C18orf56-3:2
4.1 lnc-C18orf56-3:2
5.0 lnc-C18orf56-3:2
5.1 lnc-SMAD2-387:2
5.2 lnc-ENOSF1-5:2