Transcript: lnc-EPB42-5:1

Basic information

LNCipedia transcript ID: lnc-EPB42-5:1 
LNCipedia gene ID: lnc-EPB42-5
Location (hg19): chr15:43513512-43518404
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 890 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023655; NONHSAT042060
Alternative gene names: XLOC_011456; linc-EPB42


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.3175 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EPB42-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EPB42-1:1
3.1 lnc-EPB42-1:1
4.0 lnc-EPB42-1:1
4.1 lnc-EPB42-5:1
5.0 lnc-EPB42-5:1
5.1 lnc-EPB42-5:1
5.2 lnc-EPB42-5:1