Transcript: lnc-EPHA4-3:3

Basic information

LNCipedia transcript ID: lnc-EPHA4-3:3 
LNCipedia gene ID: lnc-EPHA4-3
Location (hg19): chr2:221618333-221618749
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 302 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT077091
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -937.7874 non-coding 
CPAT coding probability 3.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EPHA4-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EPHA4-3:3
4.0 lnc-EPHA4-3:3
4.1 lnc-EPHA4-3:3
5.0 lnc-EPHA4-3:3
5.1 lnc-FARSB-17:2
5.2 lnc-EPHA4-3:3