Transcript: lnc-EPHA4-5:1

Basic information

LNCipedia transcript ID: lnc-EPHA4-5:1 
LNCipedia gene ID: lnc-EPHA4-5
Location (hg19): chr2:221455718-221510305
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 343 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_2037_chr2:221455717-221510305_heart
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -322.2523 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EPHA4-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EPHA4-5:1
4.0 lnc-EPHA4-5:1
4.1 lnc-EPHA4-5:1
5.0 lnc-EPHA4-5:1
5.1 lnc-FARSB-18:1
5.2 lnc-EPHA4-5:1