Transcript: lnc-ERC1-1:6

Basic information

LNCipedia transcript ID: lnc-ERC1-1:6 
LNCipedia gene ID: lnc-ERC1-1
Location (hg19): chr12:1609691-1610200
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 510 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000007630.1|FTMT24800000031.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -99.5237 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERC1-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ERC1-1:6
5.0 lnc-ERC1-1:6
5.1 lnc-CLEC4D-143:3
5.2 lnc-ERC1-1:6