Transcript: lnc-ERCC6L2-4:2

Basic information

LNCipedia transcript ID: lnc-ERCC6L2-4:2 
LNCipedia gene ID: lnc-ERCC6L2-4
Location (hg19): chr9:98892424-98894486
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 573 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016089; NONHSAT133419
Alternative gene names: XLOC_007478; linc-HABP4-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.6795 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERCC6L2-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C9orf102-4:2
3.1 lnc-C9orf102-4:2
4.0 lnc-C9orf102-4:2
4.1 lnc-C9orf102-4:2
5.0 lnc-C9orf102-4:2
5.1 lnc-FAM120A-86:2
5.2 lnc-ERCC6L2-4:2