Transcript: lnc-ERI1-32:21

Basic information

LNCipedia transcript ID: lnc-ERI1-32:21 
LNCipedia gene ID: lnc-ERI1-32
Location (hg19): chr8:9046560-9060629
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1158 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014607; NONHSAT124927
Alternative gene names: XLOC_006705; linc-TNKS-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.056 non-coding 
CPAT coding probability 1.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERI1-32:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-10A14.4.1-1:5
3.1 lnc-RP11-10A14.4.1-2:5
4.0 lnc-RP11-10A14.4.1-8:8
4.1 lnc-RP11-10A14.4.1-8:8
5.0 lnc-RP11-10A14.4.1-8:8
5.1 lnc-DEFB106A-32:21
5.2 lnc-ERI1-32:21