Transcript: lnc-ERICH1-19:9

Basic information

LNCipedia transcript ID: lnc-ERICH1-19:9 
LNCipedia gene ID: lnc-ERICH1-19
Ensembl Gene ID: ENSG00000282021
Ensembl Transcript ID: ENST00000633189
Location (hg19): chr8:1706374-1708613
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2240 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT124678; ENST00000633189.1
Alternative gene names: ENSG00000282021.1; CTD-2336O2.3; AC100810.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.9324 non-coding 
CPAT coding probability 16.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERICH1-19:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ERICH1-7:8
4.0 lnc-ERICH1-19:9
4.1 lnc-ERICH1-19:9
5.0 lnc-ERICH1-19:9
5.1 lnc-DEFA1B-72:19
5.2 lnc-ERICH1-19:9