Transcript: lnc-ERICH1-20:7

Basic information

LNCipedia transcript ID: lnc-ERICH1-20:7 
LNCipedia gene ID: lnc-ERICH1-20
Location (hg19): chr8:1681196-1693714
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5493 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000101401.1|MICT00000337655.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 34.6826 non-coding 
CPAT coding probability 5.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERICH1-20:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ERICH1-20:7
5.0 lnc-ERICH1-20:7
5.1 lnc-DEFA1B-74:8
5.2 lnc-ERICH1-20:7