Transcript: lnc-ERICH1-80:1

Basic information

LNCipedia transcript ID: lnc-ERICH1-80:1 
LNCipedia gene ID: lnc-ERICH1-80
Location (hg19): chr8:1231015-1250862
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 591 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014898; NONHSAT124645
Alternative gene names: XLOC_006971; linc-ERICH1-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.2414 non-coding 
CPAT coding probability 21.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERICH1-80:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ERICH1-3:1
3.1 lnc-ERICH1-3:1
4.0 lnc-ERICH1-3:1
4.1 lnc-ERICH1-3:1
5.0 lnc-ERICH1-3:1
5.1 lnc-DEFA1B-80:1
5.2 lnc-ERICH1-80:1