Transcript: lnc-ERICH2-1:3

Basic information

LNCipedia transcript ID: lnc-ERICH2-1:3 
LNCipedia gene ID: lnc-ERICH2-1
Location (hg19): chr2:171626866-171634202
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 480 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT075421
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.1603 non-coding 
CPAT coding probability 45.36% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ERICH2-1:3 no no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007405.7.1-1:8
4.0 lnc-AC007405.7.1-1:8
4.1 lnc-AC007405.7.1-1:8
5.0 lnc-AC007405.7.1-1:8
5.1 lnc-UBR3-8:3
5.2 lnc-ERICH2-1:3