Transcript: lnc-ERICH2-1:4

Basic information

LNCipedia transcript ID: lnc-ERICH2-1:4 
LNCipedia gene ID: lnc-ERICH2-1
Location (hg19): chr2:171626893-171636424
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 391 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000239467.1|FTMT20700031155.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -262.904 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERICH2-1:4 no no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC007405.7.1-1:16
5.0 lnc-AC007405.7.1-1:16
5.1 lnc-UBR3-8:4
5.2 lnc-ERICH2-1:4