Transcript: lnc-ERP44-3:7

Basic information

LNCipedia transcript ID: lnc-ERP44-3:7 
LNCipedia gene ID: lnc-ERP44-3
Location (hg19): chr9:102347480-102358620
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1864 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016440; NONHSAT133691
Alternative gene names: XLOC_007808; linc-ALG2-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -119.7298 non-coding 
CPAT coding probability 0.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERP44-3:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ERP44-1:7
3.1 lnc-ERP44-3:7
4.0 lnc-ERP44-3:7
4.1 lnc-ERP44-3:7
5.0 lnc-ERP44-3:7
5.1 lnc-ERP44-9:18
5.2 lnc-ERP44-3:7