Transcript: lnc-ERVMER34-1-1:2

Basic information

LNCipedia transcript ID: lnc-ERVMER34-1-1:2 
LNCipedia gene ID: lnc-ERVMER34-1-1
Location (hg19): chr4:53588785-53617753
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 511 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000454756; NONHSAT096379
Alternative gene names: ENSG00000226887; AC104066.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -143.5416 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERVMER34-1-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP46-1:2
3.1 lnc-USP46-1:2
4.0 lnc-USP46-1:2
4.1 lnc-USP46-1:2
5.0 lnc-USP46-1:2
5.1 lnc-FRYL-24:2
5.2 lnc-ERVMER34-1-1:2