Transcript: lnc-ESM1-4:1

Basic information

LNCipedia transcript ID: lnc-ESM1-4:1 
LNCipedia gene ID: lnc-ESM1-4
RefSeq ID: NR_104658
Location (hg19): chr5:53955987-54040086
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 821 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104658; NR_104658.1
Alternative gene names: LOC102467080


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.1865 non-coding 
CPAT coding probability 3.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ESM1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-45H22.3.1-1:2
4.0 lnc-RP11-45H22.3.1-1:2
4.1 lnc-RP11-45H22.3.1-1:2
5.0 lnc-RP11-45H22.3.1-1:2
5.1 lnc-ACTBL2-40:1
5.2 lnc-ESM1-4:1