Transcript: lnc-ESM1-4:2

Basic information

LNCipedia transcript ID: lnc-ESM1-4:2 
LNCipedia gene ID: lnc-ESM1-4
Location (hg19): chr5:53955988-53999188
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 614 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010334; NONHSAT101453
Alternative gene names: XLOC_004822; linc-ARL15


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -93.1865 non-coding 
CPAT coding probability 8.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ESM1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-45H22.3.1-1:1
3.1 lnc-RP11-45H22.3.1-1:1
4.0 lnc-RP11-45H22.3.1-1:1
4.1 lnc-RP11-45H22.3.1-1:1
5.0 lnc-RP11-45H22.3.1-1:1
5.1 lnc-ACTBL2-40:2
5.2 lnc-ESM1-4:2