Transcript: lnc-ESR2-3:5

Basic information

LNCipedia transcript ID: lnc-ESR2-3:5 
LNCipedia gene ID: lnc-ESR2-3
Location (hg19): chr14:64812192-64814329
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1044 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00022337
Alternative gene names: XLOC_011051; linc-ESR2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -125.4109 non-coding 
CPAT coding probability 39.05% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ESR2-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ESR2-1:1
3.1 lnc-ESR2-2:1
4.0 lnc-ESR2-3:5
4.1 lnc-ESR2-3:5
5.0 lnc-ESR2-3:5
5.1 lnc-DHRS7-43:14
5.2 lnc-ESR2-3:5