Transcript: lnc-ETDB-1:10

Basic information

LNCipedia transcript ID: lnc-ETDB-1:10 
LNCipedia gene ID: lnc-ETDB-1
Location (hg19): chrX:134252884-134254405
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 629 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00016928
Alternative gene names: XLOC_008242; linc-FAM127B-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 34.7943 non-coding 
CPAT coding probability 31.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ETDB-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CXorf48-2:2
3.1 lnc-CXorf48-2:3
4.0 LINC00633:3
4.1 LINC00633:3
5.0 LINC00633:3
5.1 lnc-ETDB-1:3
5.2 lnc-ETDB-1:10