Transcript: lnc-ETDB-1:9

Basic information

LNCipedia transcript ID: lnc-ETDB-1:9 
LNCipedia gene ID: lnc-ETDB-1
Location (hg19): chrX:134252927-134254426
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 369 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017377; NONHSAT138680
Alternative gene names: XLOC_008242; linc-FAM127B-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 34.7943 non-coding 
CPAT coding probability 32.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ETDB-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CXorf48-2:1
3.1 lnc-CXorf48-2:2
4.0 LINC00633:2
4.1 LINC00633:2
5.0 LINC00633:2
5.1 lnc-ETDB-1:2
5.2 lnc-ETDB-1:9