Transcript: lnc-ETFA-6:1

Basic information

LNCipedia transcript ID: lnc-ETFA-6:1 
LNCipedia gene ID: lnc-ETFA-6
Location (hg19): chr15:76480587-76484268
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3682 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1601:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 13.2379 non-coding 
CPAT coding probability 72.56% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ETFA-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ETFA-6:1
4.1 lnc-ETFA-6:1
5.0 lnc-ETFA-6:1
5.1 lnc-PEAK1-18:1
5.2 lnc-ETFA-6:1